Dicots PLAZA 4.5 gene overview : Pp3s34_470

Gene: Pp3s34_470 (Physcomitrium patens)

Overview

Gene Identifier: Pp3s34_470
Transcript Identifier: Pp3s34_470V3.1
Gene Type: Coding gene
Location: scaffold_34 : 152383-154065 : negative

Family Information

Homologous gene family: HOM04D036544
(2 genes in 1 species)
specific family

Duplication type: Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
name	Pp3s34_470V3.1
pacid	32948328
tid	PAC:32948328

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

No GO associations found for this gene.

InterPro	Description
IPR029052	Metallo-dependent phosphatase-like
IPR008979	Galactose-binding domain-like

Mapman id	Description
35.2	not assigned.not annotated