Gene: Pp3s34_430 (Physcomitrium patens)

Overview top

Gene Identifier
Pp3s34_430
Transcript Identifier
Pp3s34_430V3.1
Gene Type
Coding gene
Location
scaffold_34 : 132589-134298 : positive

Family Information

Homologous gene family
HOM04D000182
(1081 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D013207
(10 genes in 6 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPhpat.1Z034900
namePp3s34_430V3.1
pacid32948293
tidPAC:32948293

Toolbox

Explore

Create

View

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055114
IEA
PLAZA Homology (enrichment)oxidation-reduction process HOM04D000182
GO:0008152
IEA
PLAZA Homology (enrichment)metabolic process HOM04D000182
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
PLAZA Homology (enrichment)oxidoreductase activity HOM04D000182
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0005524
IEA
InterProATP binding
GO:0008134
IEA
InterProtranscription factor binding
GO:0003677
IEA
InterProDNA binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000014PAS domain
IPR009057Homeobox domain-like
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR003593AAA+ ATPase domain
IPR002078RNA polymerase sigma factor 54 interaction domain
IPR025944Sigma-54 interaction domain, conserved site
IPR025662Sigma-54 interaction domain, ATP-binding site 1
IPR002197DNA binding HTH domain, Fis-type
IPR013767PAS fold

Mapman id Description
35.2not assigned.not annotated