Dicots PLAZA 4.5 gene overview : Pp3s34_310

Gene: Pp3s34_310 (Physcomitrium patens)

Overview

Gene Identifier: Pp3s34_310
Transcript Identifier: Pp3s34_310V3.1
Gene Type: Coding gene
Location: scaffold_34 : 82796-83437 : negative

Family Information

Homologous gene family: HOM04D159071
(orphan gene)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
name	Pp3s34_310V3.1
pacid	32948335
tid	PAC:32948335

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

No GO associations found for this gene.

InterPro	Description
IPR011993	PH domain-like
IPR021722	Uncharacterised domain YvbH-like, oligomerisation domain
IPR012544	Bacterial Pleckstrin homology domain

Mapman id	Description
35.2	not assigned.not annotated