Dicots PLAZA 4.5 gene overview : Pp3c1_3780

Gene: Pp3c1_3780 (Physcomitrium patens)

Overview

Gene Identifier: Pp3c1_3780
Transcript Identifier: Pp3c1_3780V3.1
Gene Type: Coding gene
Location: Chr01 : 2883635-2887399 : negative

Family Information

Homologous gene family: HOM04D037961
(2 genes in 1 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
name	Pp3c1_3780V3.1
pacid	32969977
tid	PAC:32969977

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

No GO associations found for this gene.

No InterPro domains detected for this gene.

Mapman id	Description
35.2	not assigned.not annotated