Gene: Pp3c11_22980 (Physcomitrium patens)

Overview top

Gene Identifier
Pp3c11_22980
Transcript Identifier
Pp3c11_22980V3.2
Gene Type
Coding gene
Location
Chr11 : 15128413-15130273 : positive

Family Information

Homologous gene family
HOM04D000254
(847 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D001310
(213 genes in 55 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPhpat.011G088500
aliasPhypa_119989
aliasPp1s31_150V6
namePp3c11_22980V3.2
pacid32957585
tidPAC:32957585

Toolbox

Explore

Create

View

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046686
IEA
PLAZA Integrative Orthologyresponse to cadmium ion AT3G13920

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003729
IEA
PLAZA Integrative OrthologymRNA binding AT1G54270
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT3G13920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IEA
PLAZA Integrative Orthologyplasma membrane AT1G54270
GO:0005774
IEA
PLAZA Integrative Orthologyvacuolar membrane AT1G72730
GO:0009505
IEA
PLAZA Integrative Orthologyplant-type cell wall AT1G72730
GO:0005730
IEA
PLAZA Integrative Orthologynucleolus AT3G13920
GO:0005829
IEA
PLAZA Integrative Orthologycytosol AT3G13920
GO:0048046
IEA
PLAZA Integrative Orthologyapoplast AT3G13920
GO:0016020
IEA
PLAZA Integrative Orthologymembrane AT3G13920
GO:0005618
IEA
PLAZA Integrative Orthologycell wall AT3G13920
GO:0009506
IEA
PLAZA Integrative Orthologyplasmodesma AT3G13920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR001650Helicase, C-terminal
IPR014001Helicase superfamily 1/2, ATP-binding domain
IPR014014RNA helicase, DEAD-box type, Q motif
IPR000629ATP-dependent RNA helicase DEAD-box, conserved site
IPR011545DEAD/DEAH box helicase domain

Mapman id Description
17.4.2.1.Protein biosynthesis.translation initiation.mRNA loading.mRNA unwinding factor (eIF4A)