Gene: Potri.008G173100 (Populus trichocarpa)

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Gene Identifier
Potri.008G173100
Transcript Identifier
Potri.008G173100.2
Gene Type
Coding gene
Location
Chr08 : 11813207-11814586 : negative

Family Information

Homologous gene family
HOM04D000252
(847 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D000242
(632 genes in 54 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idPotri.008G173100.v3.1
pacid37271842
tidPotri.008G173100.2.v3.1
tidPotri.008G173100.2

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034968
IEA
InterProhistone lysine methylation
GO:0016571
IEA
InterProhistone methylation
GO:0040029
IEA
PLAZA Integrative Orthologyregulation of gene expression, epigenetic AT2G33290
GO:0009294
IEA
PLAZA Integrative OrthologyDNA mediated transformation AT4G13460
GO:0080188
IEA
PLAZA Integrative OrthologyRNA-directed DNA methylation AT4G13460

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042393
IEA
InterProhistone binding
GO:0008270
IEA
InterProzinc ion binding
GO:0018024
IEA
InterProhistone-lysine N-methyltransferase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005720
IEA
PLAZA Integrative Orthologynuclear heterochromatin AT2G33290

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003105SRA-YDG
IPR007728Pre-SET domain
IPR001214SET domain
IPR025794Histone H3-K9 methyltransferase, plant
IPR015947PUA-like domain

Mapman id Description
12.3.3.7.Chromatin organisation.histone modifications.histone lysine methylation.class-V histone methyltransferase (Suvar)
12.5.1.1.Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.methyl-DNA-binding factor (SUVH2|9)