Gene: Potri.008G153300 (Populus trichocarpa)

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Gene Identifier
Potri.008G153300
Transcript Identifier
Potri.008G153300.2
Gene Type
Coding gene
Location
Chr08 : 10405217-10408036 : positive

Family Information

Homologous gene family
HOM04D000436
(564 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D000406
(455 genes in 55 species)
specific family

Descriptions

Description
similar to O-acetylserine (thiol)lyase [Populus x canescens]. [ORG:Populus alba x Populus tremula]; [ co-ortholog (5of8) of S46438, Q43317, AAL66291, BAA05965, AAQ57205, CAA06819, ]

Identifiers

Type Value
aliasPOPTR_0008s15320
aliasfgenesh4_pg.C_LG_VIII001376
idPotri.008G153300.v3.1
pacid37270938
tidPotri.008G153300.2.v3.1
tidPotri.008G153300.2

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019344
IEA
PLAZA Integrative Orthologycysteine biosynthetic process AT4G14880
GO:0007568
IEA
PLAZA Integrative Orthologyaging AT4G14880
GO:0046686
IEA
PLAZA Integrative Orthologyresponse to cadmium ion AT4G14880
GO:0080145
IEA
PLAZA Tree-based Orthologycysteine homeostasis AT5G28030
GO:0009567
IEA
PLAZA Integrative Orthologydouble fertilization forming a zygote and endosperm AT4G14880
GO:0009860
IEA
PLAZA Integrative Orthologypollen tube growth AT4G14880
GO:0010043
IEA
PLAZA Integrative Orthologyresponse to zinc ion AT3G22460
GO:0006535
IEA
InterProcysteine biosynthetic process from serine

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT4G14880
GO:0080146
IEA
PLAZA Tree-based OrthologyL-cysteine desulfhydrase activity AT5G28030
GO:0030170
IEA
PLAZA Tree-based Orthologypyridoxal phosphate binding AT5G28030
GO:0004124
IEA
InterProcysteine synthase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IEA
PLAZA Integrative Orthologycytosol AT4G14880
GO:0048046
IEA
PLAZA Integrative Orthologyapoplast AT4G14880
GO:0016020
IEA
PLAZA Integrative Orthologymembrane AT4G14880
GO:0009507
IEA
PLAZA Integrative Orthologychloroplast AT4G14880
GO:0005777
IEA
PLAZA Integrative Orthologyperoxisome AT4G14880
GO:0005634
IEA
PLAZA Integrative Orthologynucleus AT4G14880
GO:0005886
IEA
PLAZA Integrative Orthologyplasma membrane AT4G14880
GO:0005774
IEA
PLAZA Integrative Orthologyvacuolar membrane AT4G14880
GO:0009570
IEA
PLAZA Integrative Orthologychloroplast stroma AT4G14880

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzyme
IPR005859Cysteine synthase CysK
IPR005856Cysteine synthase

Mapman id Description
4.1.4.2.2.Amino acid metabolism.biosynthesis.serine family.cysteine.O-acetylserine sulfydrylase