Gene: Potri.006G119000 (Populus trichocarpa)

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Gene Identifier
Potri.006G119000
Transcript Identifier
Potri.006G119000.1
Gene Type
Coding gene
Location
Chr06 : 9407384-9412960 : positive

Family Information

Homologous gene family
HOM04D000254
(847 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D004343
(92 genes in 55 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliaseugene3.00280267
aliasPOPTR_0006s12050
aliasPOPTR_0006s12060
idPotri.006G119000.v3.1
pacid37244225
tidPotri.006G119000.1.v3.1
tidPotri.006G119000.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016973
IEA
PLAZA Integrative Orthologypoly(A)+ mRNA export from nucleus AT3G53110
GO:0009737
IEA
PLAZA Integrative Orthologyresponse to abscisic acid AT3G53110
GO:0009408
IEA
PLAZA Integrative Orthologyresponse to heat AT3G53110
GO:0009409
IEA
PLAZA Integrative Orthologyresponse to cold AT3G53110

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0008186
IEA
PLAZA Integrative OrthologyRNA-dependent ATPase activity AT3G53110

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IEA
PLAZA Integrative Orthologyplasma membrane AT3G53110
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm AT3G53110
GO:0005635
IEA
PLAZA Integrative Orthologynuclear envelope AT3G53110

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001650Helicase, C-terminal
IPR011545DEAD/DEAH box helicase domain
IPR014014RNA helicase, DEAD-box type, Q motif
IPR014001Helicase superfamily 1/2, ATP-binding domain
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
16.11.3.1.RNA processing.messenger ribonucleoparticle (mRNP) export.mRNP remodeling.ATP-dependent helicase (DBP5/LOS4)