Dicots PLAZA 4.5 gene overview : Migut.G00884

Gene: Migut.G00884 (Erythranthe guttata)

Overview

Gene Identifier: Migut.G00884
Transcript Identifier: Migut.G00884.1
Gene Type: Coding gene
Location: scaffold_7 : 8021561-8023379 : negative

Family Information

Homologous gene family: HOM04D000075
(2009 genes in 54 species)
specific family
Orthologous gene family: ORTHO04D003292
(116 genes in 50 species)
specific family

Duplication type: Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
tid	Migut.G00884.1.v2.0
id	Migut.G00884.v2.0
pacid	28943360
pid	Migut.G00884.1.p

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009567	IEA	PLAZA Integrative Orthology	double fertilization forming a zygote and endosperm	AT1G65450

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016747	IEA	InterPro	transferase activity, transferring acyl groups other than amino-acyl groups

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	IEA	PLAZA Integrative Orthology	cytoplasm	AT1G65450
GO:0005634	IEA	PLAZA Integrative Orthology	nucleus	AT1G65450

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR003480	Transferase

Mapman id	Description
50.2.3	.Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase