Dicots PLAZA 4.5 gene overview : Medtr7g116420

Gene: Medtr7g116420 (Medicago truncatula)

Overview

Gene Identifier: Medtr7g116420
Transcript Identifier: Medtr7g116420.1
Gene Type: Coding gene
Location: chr7 : 48017718-48020454 : negative

Family Information

Homologous gene family: HOM04D000133
(1389 genes in 52 species)
specific family
Orthologous gene family: ORTHO04D000113
(921 genes in 52 species)
specific family

Duplication type: Block duplicate

Descriptions

Description: carboxyl-terminal peptidase

Identifiers

Type	Value
id	Medtr7g116420.JCVIMt4.0v1
tid	Medtr7g116420.1.JCVIMt4.0v1
pacid	31082452

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

No GO associations found for this gene.

InterPro	Description
IPR025521	Neprosin activation peptide
IPR004314	Neprosin

Mapman id	Description
35.2	not assigned.not annotated