Dicots PLAZA 4.5 gene overview : LOC_Os12g30580

Gene: LOC_Os12g30580 (Oryza sativa ssp. japonica)

Overview

Gene Identifier: LOC_Os12g30580
Transcript Identifier: LOC_Os12g30580.1
Gene Type: Coding gene
Location: Chr12 : 18364306-18365038 : positive

Family Information

Homologous gene family: HOM04D000083
(1914 genes in 55 species)
specific family

Descriptions

Description: expressed protein

Identifiers

Type	Value
id	LOC_Os12g30580.MSUv7.0
pacid	33152788
tid	LOC_Os12g30580.1.MSUv7.0
tid	LOC_Os12g30580.1
UniProtKB	Q2QQL9

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006468	IEA	PLAZA Homology (enrichment)	protein phosphorylation	HOM04D000083

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004672	IEA	PLAZA Homology (enrichment)	protein kinase activity	HOM04D000083
GO:0005524	IEA	PLAZA Homology (enrichment)	ATP binding	HOM04D000083

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009536	RCA	Gene Ontology	plastid

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

No InterPro domains detected for this gene.

Mapman id	Description
35.2	not assigned.not annotated