Dicots PLAZA 4.5 gene overview : Glyma.U037500

Gene: Glyma.U037500 (Glycine max)

Overview

Gene Identifier: Glyma.U037500
Transcript Identifier: Glyma.U037500.1
Gene Type: Coding gene
Location: scaffold_412 : 89-1216 : positive

Family Information

Homologous gene family: HOM04D000013
(4504 genes in 49 species)
specific family
Orthologous gene family: ORTHO04D010201
(40 genes in 1 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
tid	Glyma.U037500.1.Wm82.a2.v1
id	Glyma.U037500.Wm82.a2.v1
pacid	30545326
pid	Glyma.U037500.1.p

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	PLAZA Homology (enrichment)	protein binding	HOM04D000013

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR017451	F-box associated interaction domain

Mapman id	Description
35.2	not assigned.not annotated