Dicots PLAZA 4.5 gene overview : Glyma.U006800

Gene: Glyma.U006800 (Glycine max)

Overview

Gene Identifier: Glyma.U006800
Transcript Identifier: Glyma.U006800.1
Gene Type: Coding gene
Location: scaffold_1718 : 70-826 : negative

Family Information

Homologous gene family: HOM04D003884
(88 genes in 54 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
tid	Glyma.U006800.1.Wm82.a2.v1
id	Glyma.U006800.Wm82.a2.v1
pacid	30541488
pid	Glyma.U006800.1.p

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016567	IEA	InterPro	protein ubiquitination
GO:0009651	IEA	PLAZA Integrative Orthology	response to salt stress	AT3G07370
GO:0009266	IEA	PLAZA Integrative Orthology	response to temperature stimulus	AT3G07370
GO:0009737	IEA	PLAZA Integrative Orthology	response to abscisic acid	AT3G07370

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004842	IEA	InterPro	ubiquitin-protein transferase activity
GO:0051087	IEA	PLAZA Integrative Orthology	chaperone binding	AT3G07370
GO:0005515	IEA	PLAZA Homology (enrichment)	protein binding	HOM04D003884

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR003613	U box domain

Mapman id	Description
19.2.2.1.5.2.2	.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.bifunctional co-chaperone and E3 ubiquitin ligase (CHIP)