Dicots PLAZA 4.5 gene overview : Glyma.10G262800

Gene: Glyma.10G262800 (Glycine max)

Overview

Gene Identifier: Glyma.10G262800
Transcript Identifier: Glyma.10G262800.1
Gene Type: Coding gene
Location: Chr10 : 48741269-48746810 : negative

Family Information

Homologous gene family: HOM04D000820
(337 genes in 54 species)
specific family
Orthologous gene family: ORTHO04D000767
(299 genes in 54 species)
specific family

Duplication type: Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
tid	Glyma.10G262800.1.Wm82.a2.v1
id	Glyma.10G262800.Wm82.a2.v1
pacid	30475027
pid	Glyma.10G262800.1.p
old_id	Glyma10g40910
old_tid	Glyma10g40910.1

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006629	IEA	InterPro	lipid metabolic process
GO:0050832	IEA	PLAZA Integrative Orthology	defense response to fungus	AT2G15230
GO:0032922	IEA	PLAZA Integrative Orthology	circadian regulation of gene expression	AT2G15230
GO:0009867	IEA	PLAZA Integrative Orthology	jasmonic acid mediated signaling pathway	AT2G15230
GO:0042742	IEA	PLAZA Integrative Orthology	defense response to bacterium	AT2G15230
GO:0006546	IEA	PLAZA Integrative Orthology	glycine catabolic process	AT2G15230
GO:0010183	IEA	PLAZA Integrative Orthology	pollen tube guidance	AT2G15230
GO:0009640	IEA	PLAZA Integrative Orthology	photomorphogenesis	AT2G15230

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016788	IEA	InterPro	hydrolase activity, acting on ester bonds
GO:0004806	IEA	PLAZA Integrative Orthology	triglyceride lipase activity	AT2G15230
GO:0003924	IEA	PLAZA Integrative Orthology	GTPase activity	AT2G15230
GO:0004620	IEA	PLAZA Integrative Orthology	phospholipase activity	AT2G15230
GO:0047714	IEA	PLAZA Integrative Orthology	galactolipase activity	AT2G15230

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005759	IEA	PLAZA Integrative Orthology	mitochondrial matrix	AT2G15230
GO:0005737	IEA	PLAZA Integrative Orthology	cytoplasm	AT2G15230
GO:0005615	IEA	PLAZA Integrative Orthology	extracellular space	AT2G15230
GO:0005634	IEA	PLAZA Integrative Orthology	nucleus	AT2G15230
GO:0005886	IEA	PLAZA Integrative Orthology	plasma membrane	AT2G15230
GO:0090404	IEA	PLAZA Integrative Orthology	pollen tube tip	AT2G15230

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR029058	Alpha/Beta hydrolase fold
IPR022742	Serine aminopeptidase, S33
IPR006693	Partial AB-hydrolase lipase domain
IPR025483	Lipase, eukaryotic

Mapman id	Description
5.7.1.2.2	.Lipid metabolism.lipid degradation.triacylglycerol lipase activities.diacyl-/triacylglycerol lipase activities.lipase (LIP)