Dicots PLAZA 4.5 gene overview : Glyma.01G015200

Gene: Glyma.01G015200 (Glycine max)

Overview

Gene Identifier: Glyma.01G015200
Transcript Identifier: Glyma.01G015200.1
Gene Type: Coding gene
Location: Chr01 : 1501239-1505312 : negative

Family Information

Homologous gene family: HOM04D000877
(319 genes in 53 species)
specific family
Orthologous gene family: ORTHO04D000713
(311 genes in 53 species)
specific family

Duplication type: Tandem duplicate and Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
tid	Glyma.01G015200.1.Wm82.a2.v1
id	Glyma.01G015200.Wm82.a2.v1
pacid	30545190
pid	Glyma.01G015200.1.p
alias	Glyma01g01920

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010102	IEA	PLAZA Integrative Orthology	lateral root morphogenesis	AT1G32230
GO:0012501	IEA	PLAZA Integrative Orthology	programmed cell death	AT1G32230
GO:0006809	IEA	PLAZA Integrative Orthology	nitric oxide biosynthetic process	AT1G32230
GO:2000377	IEA	PLAZA Integrative Orthology	regulation of reactive oxygen species metabolic process	AT1G32230
GO:0072593	IEA	PLAZA Tree-based Orthology	reactive oxygen species metabolic process	AT5G62520
GO:0009816	IEA	PLAZA Integrative Orthology	defense response to bacterium, incompatible interaction	AT1G32230
GO:0006979	IEA	PLAZA Integrative Orthology	response to oxidative stress	AT1G32230
GO:0048573	IEA	PLAZA Integrative Orthology	photoperiodism, flowering	AT2G35510
GO:0009414	IEA	PLAZA Integrative Orthology	response to water deprivation	AT1G32230
GO:0009723	IEA	PLAZA Integrative Orthology	response to ethylene	AT1G32230
GO:0009867	IEA	PLAZA Integrative Orthology	jasmonic acid mediated signaling pathway	AT1G32230
GO:0000303	IEA	PLAZA Integrative Orthology	response to superoxide	AT1G32230
GO:0042542	IEA	PLAZA Integrative Orthology	response to hydrogen peroxide	AT1G32230
GO:0009873	IEA	PLAZA Integrative Orthology	ethylene-activated signaling pathway	AT1G32230
GO:0006970	IEA	PLAZA Integrative Orthology	response to osmotic stress	AT1G32230
GO:0009793	IEA	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT1G32230
GO:0010193	IEA	PLAZA Integrative Orthology	response to ozone	AT1G32230
GO:0009651	IEA	PLAZA Integrative Orthology	response to salt stress	AT1G32230

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	PLAZA Integrative Orthology	protein binding	AT1G32230
GO:0003950	IEA	PLAZA Homology (enrichment)	NAD+ ADP-ribosyltransferase activity	HOM04D000877

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005739	IEA	PLAZA Tree-based Orthology	mitochondrion	AT5G62520
GO:0005737	IEA	PLAZA Integrative Orthology	cytoplasm	AT1G32230
GO:0005634	IEA	PLAZA Integrative Orthology	nucleus	AT1G32230

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

No InterPro domains detected for this gene.

Mapman id	Description
35.1	not assigned.annotated