Dicots PLAZA 4.5 gene overview : Glyma.01G014600

Gene: Glyma.01G014600 (Glycine max)

Overview

Gene Identifier: Glyma.01G014600
Transcript Identifier: Glyma.01G014600.1
Gene Type: Coding gene
Location: Chr01 : 1404977-1410681 : positive

Family Information

Homologous gene family: HOM04D000219
(933 genes in 53 species)
specific family
Orthologous gene family: ORTHO04D000121
(893 genes in 53 species)
specific family

Duplication type: Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
tid	Glyma.01G014600.1.Wm82.a2.v1
id	Glyma.01G014600.Wm82.a2.v1
pacid	30543378
pid	Glyma.01G014600.1.p
alias	Glyma01g01850
old_tid	Glyma01g01850.1

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...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated
GO:0090627	IEA	PLAZA Tree-based Orthology	plant epidermal cell differentiation	AT4G21750
GO:0031047	IEA	PLAZA Tree-based Orthology	gene silencing by RNA	AT4G25530
GO:0048497	IEA	PLAZA Integrative Orthology	maintenance of floral organ identity	AT5G46880
GO:0043481	IEA	PLAZA Tree-based Orthology	anthocyanin accumulation in tissues in response to UV light	AT4G00730
GO:0009909	IEA	PLAZA Tree-based Orthology	regulation of flower development	AT4G25530
GO:0009913	IEA	PLAZA Tree-based Orthology	epidermal cell differentiation	AT4G21750
GO:0009957	IEA	PLAZA Tree-based Orthology	epidermal cell fate specification	AT1G79840
GO:0006349	IEA	PLAZA Tree-based Orthology	regulation of gene expression by genetic imprinting	AT4G25530
GO:0009827	IEA	PLAZA Tree-based Orthology	plant-type cell wall modification	AT4G00730
GO:0009828	IEA	PLAZA Tree-based Orthology	plant-type cell wall loosening	AT1G73360
GO:0048364	IEA	PLAZA Tree-based Orthology	root development	AT4G00730
GO:0048825	IEA	PLAZA Tree-based Orthology	cotyledon development	AT4G21750
GO:0009911	IEA	PLAZA Tree-based Orthology	positive regulation of flower development	AT4G25530
GO:0009845	IEA	PLAZA Tree-based Orthology	seed germination	AT4G21750
GO:0042335	IEA	PLAZA Tree-based Orthology	cuticle development	AT4G00730
GO:0010090	IEA	PLAZA Tree-based Orthology	trichome morphogenesis	AT1G05230
GO:0048765	IEA	PLAZA Tree-based Orthology	root hair cell differentiation	AT4G00730
GO:0010091	IEA	PLAZA Tree-based Orthology	trichome branching	AT1G73360
GO:0010062	IEA	PLAZA Tree-based Orthology	negative regulation of trichoblast fate specification	AT1G79840

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008289	IEA	InterPro	lipid binding
GO:0003677	IEA	InterPro	DNA binding
GO:0043565	IEA	InterPro	sequence-specific DNA binding
GO:0005515	IEA	PLAZA Integrative Orthology	protein binding	AT4G17710
GO:0003700	IEA	PLAZA Tree-based Orthology	transcription factor activity, sequence-specific DNA binding	AT1G73360
GO:0000976	IEA	PLAZA Tree-based Orthology	transcription regulatory region sequence-specific DNA binding	AT1G73360
GO:0042803	IEA	PLAZA Tree-based Orthology	protein homodimerization activity	AT4G25530

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IEA	PLAZA Tree-based Orthology	nucleus	AT1G79840

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR023393	START-like domain
IPR002913	START domain
IPR001356	Homeobox domain
IPR017970	Homeobox, conserved site
IPR009057	Homeobox domain-like

Mapman id	Description
15.5.3.3	.RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP IV)