Dicots PLAZA 4.5 gene overview : Glyma.01G010200

Gene: Glyma.01G010200 (Glycine max)

Overview

Gene Identifier: Glyma.01G010200
Transcript Identifier: Glyma.01G010200.1
Gene Type: Coding gene
Location: Chr01 : 993369-997222 : negative

Family Information

Homologous gene family: HOM04D003933
(87 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D005061
(84 genes in 55 species)
specific family

Duplication type: Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
tid	Glyma.01G010200.1.Wm82.a2.v1
id	Glyma.01G010200.Wm82.a2.v1
pacid	30544961
pid	Glyma.01G010200.1.p
alias	Glyma01g01370
old_tid	Glyma01g01370.1

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008152	IEA	InterPro	metabolic process
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0009735	IEA	PLAZA Integrative Orthology	response to cytokinin	AT1G32060
GO:0042742	IEA	PLAZA Integrative Orthology	defense response to bacterium	AT1G32060
GO:0009409	IEA	PLAZA Integrative Orthology	response to cold	AT1G32060

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005524	IEA	InterPro	ATP binding
GO:0016301	IEA	InterPro	kinase activity
GO:0008974	IEA	InterPro	phosphoribulokinase activity
GO:0005515	IEA	PLAZA Integrative Orthology	protein binding	AT1G32060

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009579	IEA	PLAZA Integrative Orthology	thylakoid	AT1G32060
GO:0009535	IEA	PLAZA Integrative Orthology	chloroplast thylakoid membrane	AT1G32060
GO:0009941	IEA	PLAZA Integrative Orthology	chloroplast envelope	AT1G32060
GO:0048046	IEA	PLAZA Integrative Orthology	apoplast	AT1G32060
GO:0010319	IEA	PLAZA Integrative Orthology	stromule	AT1G32060
GO:0016020	IEA	PLAZA Integrative Orthology	membrane	AT1G32060
GO:0009507	IEA	PLAZA Integrative Orthology	chloroplast	AT1G32060
GO:0009570	IEA	PLAZA Integrative Orthology	chloroplast stroma	AT1G32060

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR006083	Phosphoribulokinase/uridine kinase
IPR006082	Phosphoribulokinase
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Mapman id	Description
1.2.11	Photosynthesis.calvin cycle.phosphoribulokinase