Dicots PLAZA 4.5 gene overview : Glyma.01G007100

Gene: Glyma.01G007100 (Glycine max)

Overview

Gene Identifier: Glyma.01G007100
Transcript Identifier: Glyma.01G007100.1
Gene Type: Coding gene
Location: Chr01 : 707570-708601 : negative

Family Information

Homologous gene family: HOM04D000026
(3037 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D000326
(528 genes in 52 species)
specific family

Duplication type: Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
tid	Glyma.01G007100.1.Wm82.a2.v1
id	Glyma.01G007100.Wm82.a2.v1
pacid	30541759
pid	Glyma.01G007100.1.p
alias	Glyma01g01050
old_tid	Glyma01g01050.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006855	IEA	InterPro	drug transmembrane transport
GO:0055085	IEA	InterPro	transmembrane transport

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0015238	IEA	InterPro	drug transmembrane transporter activity
GO:0015297	IEA	InterPro	antiporter activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016020	IEA	InterPro	membrane

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002528	Multi antimicrobial extrusion protein

Mapman id	Description
24.2.4.1.1	.Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX)