Dicots PLAZA 4.5 gene overview : Glyma.01G006700

Gene: Glyma.01G006700 (Glycine max)

Overview

Gene Identifier: Glyma.01G006700
Transcript Identifier: Glyma.01G006700.1
Gene Type: Coding gene
Location: Chr01 : 652880-658257 : negative

Family Information

Homologous gene family: HOM04D001762
(176 genes in 53 species)
specific family
Orthologous gene family: ORTHO04D002487
(140 genes in 53 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
tid	Glyma.01G006700.1.Wm82.a2.v1
id	Glyma.01G006700.Wm82.a2.v1
pacid	30543032
pid	Glyma.01G006700.1.p
old_id	Glyma01g01000
old_tid	Glyma01g01000.1

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010305	IEA	PLAZA Tree-based Orthology	leaf vascular tissue pattern formation	AT3G54720
GO:0006508	IEA	PLAZA Tree-based Orthology	proteolysis	AT3G54720
GO:0009908	IEA	PLAZA Tree-based Orthology	flower development	AT3G54720
GO:0048364	IEA	PLAZA Tree-based Orthology	root development	AT3G54720
GO:0009910	IEA	PLAZA Tree-based Orthology	negative regulation of flower development	AT3G54720
GO:0048507	IEA	PLAZA Tree-based Orthology	meristem development	AT3G54720
GO:0010080	IEA	PLAZA Tree-based Orthology	regulation of floral meristem growth	AT3G54720
GO:0010073	IEA	PLAZA Integrative Orthology	meristem maintenance	AT5G19740
GO:0010081	IEA	PLAZA Tree-based Orthology	regulation of inflorescence meristem growth	AT3G54720
GO:0009793	IEA	PLAZA Tree-based Orthology	embryo development ending in seed dormancy	AT3G54720
GO:0010082	IEA	PLAZA Tree-based Orthology	regulation of root meristem growth	AT3G54720
GO:0009640	IEA	PLAZA Tree-based Orthology	photomorphogenesis	AT3G54720

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	PLAZA Tree-based Orthology	protein binding	AT3G54720
GO:0004181	IEA	PLAZA Tree-based Orthology	metallocarboxypeptidase activity	AT3G54720

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005739	IEA	PLAZA Integrative Orthology	mitochondrion	AT4G07670
GO:0005773	IEA	PLAZA Integrative Orthology	vacuole	AT5G19740
GO:0005783	IEA	PLAZA Integrative Orthology	endoplasmic reticulum	AT5G19740

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR007365	Transferrin receptor-like, dimerisation domain
IPR003137	PA domain
IPR007484	Peptidase M28

Mapman id	Description
19.4.5.7.3	.Protein homeostasis.proteolysis.metallopeptidase activities.carboxypeptidase activities.M28-class carboxypeptidase