Dicots PLAZA 4.5 gene overview : Glyma.01G005700

Gene: Glyma.01G005700 (Glycine max)

Overview

Gene Identifier: Glyma.01G005700
Transcript Identifier: Glyma.01G005700.1
Gene Type: Coding gene
Location: Chr01 : 562924-566748 : negative

Family Information

Homologous gene family: HOM04D000552
(473 genes in 54 species)
specific family
Orthologous gene family: ORTHO04D000391
(466 genes in 54 species)
specific family

Duplication type: Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
tid	Glyma.01G005700.1.Wm82.a2.v1
id	Glyma.01G005700.Wm82.a2.v1
pacid	30545088
pid	Glyma.01G005700.1.p
alias	Glyma01g00900
old_tid	Glyma01g00900.2

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016311	IEA	PLAZA Tree-based Orthology	dephosphorylation	AT5G24780
GO:0006979	IEA	PLAZA Tree-based Orthology	response to oxidative stress	AT5G24770
GO:0002213	IEA	PLAZA Tree-based Orthology	defense response to insect	AT5G24770
GO:0009625	IEA	PLAZA Tree-based Orthology	response to insect	AT5G24770
GO:0006952	IEA	PLAZA Tree-based Orthology	defense response	AT5G24780
GO:0009753	IEA	PLAZA Tree-based Orthology	response to jasmonic acid	AT5G24780
GO:0009611	IEA	PLAZA Tree-based Orthology	response to wounding	AT5G24770
GO:0046688	IEA	PLAZA Tree-based Orthology	response to copper ion	AT5G24770
GO:0042538	IEA	PLAZA Tree-based Orthology	hyperosmotic salinity response	AT5G24770

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003993	IEA	PLAZA Tree-based Orthology	acid phosphatase activity	AT5G24780
GO:0008134	IEA	PLAZA Tree-based Orthology	transcription factor binding	AT5G24780

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005829	IEA	PLAZA Integrative Orthology	cytosol	AT4G29260
GO:0016020	IEA	PLAZA Tree-based Orthology	membrane	AT5G44020
GO:0005618	IEA	PLAZA Tree-based Orthology	cell wall	AT1G04040
GO:0009506	IEA	PLAZA Tree-based Orthology	plasmodesma	AT1G04040
GO:0009507	IEA	PLAZA Tree-based Orthology	chloroplast	AT5G44020
GO:0005773	IEA	PLAZA Integrative Orthology	vacuole	AT4G29260
GO:0009505	IEA	PLAZA Tree-based Orthology	plant-type cell wall	AT1G04040
GO:0005774	IEA	PLAZA Integrative Orthology	vacuolar membrane	AT4G29260
GO:0022626	IEA	PLAZA Tree-based Orthology	cytosolic ribosome	AT5G24770

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR023214	HAD-like domain
IPR005519	Acid phosphatase, class B-like
IPR014403	Vegetative storage protein/acid phosphatase

Mapman id	Description
35.1	not assigned.annotated