Dicots PLAZA 4.5 gene overview : Glyma.01G002800

Gene: Glyma.01G002800 (Glycine max)

Overview

Gene Identifier: Glyma.01G002800
Transcript Identifier: Glyma.01G002800.1
Gene Type: Coding gene
Location: Chr01 : 343880-344482 : positive

Family Information

Homologous gene family: HOM04D000480
(526 genes in 54 species)
specific family
Orthologous gene family: ORTHO04D000889
(272 genes in 49 species)
specific family

Duplication type: Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
tid	Glyma.01G002800.1.Wm82.a2.v1
id	Glyma.01G002800.Wm82.a2.v1
pacid	30544146
pid	Glyma.01G002800.1.p
old_id	Glyma01g00580
old_tid	Glyma01g00580.2

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016192	IEA	PLAZA Integrative Orthology	vesicle-mediated transport	AT5G56230

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005783	IEA	PLAZA Integrative Orthology	endoplasmic reticulum	AT5G56230

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR004895	Prenylated rab acceptor PRA1

Mapman id	Description
22.8.4.3.2	.Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GDI displacement factor (GDF) activities.B-G-class Rab-GDF protein