Dicots PLAZA 4.5 gene overview : GSVIVG01019801001

Gene: GSVIVG01019801001 (Vitis vinifera)

Overview

Gene Identifier: GSVIVG01019801001
Transcript Identifier: GSVIVT01019801001
Gene Type: Coding gene
Location: chr2 : 3445601-3447792 : negative

Family Information

Homologous gene family: HOM04D000133
(1389 genes in 52 species)
specific family
Orthologous gene family: ORTHO04D002256
(150 genes in 19 species)
specific family

Duplication type: Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
id	GSVIVG01019801001.Genoscope12X
pacid	17829357
tid	GSVIVT01019801001.Genoscope12X
tid	GSVIVT01019801001

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

No GO associations found for this gene.

InterPro	Description
IPR004314	Neprosin
IPR025521	Neprosin activation peptide

Mapman id	Description
35.2	not assigned.not annotated