Dicots PLAZA 4.5 gene overview : Eucgr.H02001

Gene: Eucgr.H02001 (Eucalyptus grandis)

Overview

Gene Identifier: Eucgr.H02001
Transcript Identifier: Eucgr.H02001.1
Gene Type: Coding gene
Location: Chr08 : 20890230-20890872 : negative

Family Information

Homologous gene family: HOM04D036316
(2 genes in 1 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
tid	Eucgr.H02001.1.v2.0
id	Eucgr.H02001.v2.0
pacid	32043533
pid	Eucgr.H02001.1.p
alias	Egrandis_v1_0.041404m

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0048364	IEA	InterPro	root development

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR033250	C-terminally encoded peptide

Mapman id	Description
11.10.1.3.1	.Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CEP-peptide activity.CEP-precursor polypeptide
25.1.1.1	.Nutrient uptake.nitrogen assimilation.systemic nitrogen signalling.signalling polypeptide (CEP)