Dicots PLAZA 4.5 gene overview : DCAR_017441

Gene: DCAR_017441 (Daucus carota)

Overview

Gene Identifier: DCAR_017441
Transcript Identifier: DCAR_017441
Gene Type: Coding gene
Location: DCARv2_Chr5 : 18465326-18467195 : positive

Family Information

Homologous gene family: HOM04D000278
(779 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D007200
(68 genes in 25 species)
specific family

Duplication type: Tandem duplicate

Descriptions

Description: hypothetical protein

Identifiers

Type	Value
tid	DCAR_017441.v1.0.388
id	DCAR_017441.v1.0
pacid	36077934

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016866	IEA	PLAZA Homology (enrichment)	intramolecular transferase activity	HOM04D000278

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid

Mapman id	Description
35.1	not assigned.annotated