Dicots PLAZA 4.5 gene overview : DCAR_007265

Gene: DCAR_007265 (Daucus carota)

Overview

Gene Identifier: DCAR_007265
Transcript Identifier: DCAR_007265
Gene Type: Coding gene
Location: DCARv2_Chr2 : 32840522-32842787 : positive

Family Information

Homologous gene family: HOM04D000036
(2681 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D001506
(194 genes in 53 species)
specific family

Duplication type: Block duplicate

Descriptions

Description: hypothetical protein

Identifiers

Type	Value
tid	DCAR_007265.v1.0.388
id	DCAR_007265.v1.0
pacid	36064595

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006468	IEA	InterPro	protein phosphorylation
GO:0010069	IEA	PLAZA Integrative Orthology	zygote asymmetric cytokinesis in embryo sac	AT2G01210
GO:0010070	IEA	PLAZA Integrative Orthology	zygote asymmetric cell division	AT2G01210
GO:0046777	IEA	PLAZA Integrative Orthology	protein autophosphorylation	AT2G01210

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004672	IEA	InterPro	protein kinase activity
GO:0005524	IEA	InterPro	ATP binding
GO:0005515	IEA	InterPro	protein binding
GO:0016301	IEA	PLAZA Integrative Orthology	kinase activity	AT2G01210
GO:0004674	IEA	PLAZA Integrative Orthology	protein serine/threonine kinase activity	AT2G01210

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0090406	IEA	PLAZA Integrative Orthology	pollen tube	AT2G01210
GO:0005886	IEA	PLAZA Integrative Orthology	plasma membrane	AT2G01210
GO:0009505	IEA	PLAZA Integrative Orthology	plant-type cell wall	AT2G01210

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR032675	Leucine-rich repeat domain, L domain-like
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR001611	Leucine-rich repeat
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain

Mapman id	Description
18.4.1.3	.Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (LRR-III)