Gene: Cre06.g278172 (Chlamydomonas reinhardtii)

Overview top

Gene Identifier
Cre06.g278172
Transcript Identifier
Cre06.g278172.t1.1
Gene Type
Coding gene
Location
chromosome_6 : 3843396-3845586 : negative

Family Information

Homologous gene family
HOM04D000400
(604 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D001640
(184 genes in 55 species)
specific family

Descriptions

Description
Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III)
Endosomal R-SNARE protein, Vamp7/Nyv1-family (R.III). Conserved Protein. Class R.III SNARE, involved in Golgi/PM and Golgi/endosomal trafficking (PMID: 17596510). Most similar to VAMP71-family of land plants. Previously annotated as VAMP75

Identifiers

Type Value
aliasg6315.t1
idCre06.g278172.v5.5
pacid30778773
tidCre06.g278172.t1.1.v5.5
tidCre06.g278172.t1.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006810
IEA
InterProtransport
GO:0010118
IEA
PLAZA Integrative Orthologystomatal movement AT4G32150
GO:0009651
IEA
PLAZA Integrative Orthologyresponse to salt stress AT5G22360
GO:0009737
IEA
PLAZA Integrative Orthologyresponse to abscisic acid AT4G32150
GO:0061025
IEA
PLAZA Integrative Orthologymembrane fusion AT4G32150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0005773
IEA
PLAZA Integrative Orthologyvacuole AT5G22360
GO:0005886
IEA
PLAZA Integrative Orthologyplasma membrane AT4G32150
GO:0005774
IEA
PLAZA Integrative Orthologyvacuolar membrane AT2G25340
GO:0005794
IEA
PLAZA Integrative OrthologyGolgi apparatus AT5G22360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001388Synaptobrevin
IPR010908Longin domain
IPR011012Longin-like domain

Mapman id Description
22.7.5.1.Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.VAMP7-group component