Gene: Cla021798.g (Citrullus lanatus)

Overview top

Gene Identifier
Cla021798.g
Transcript Identifier
Cla021798
Gene Type
Coding gene
Location
Chr5 : 6311474-6313903 : positive

Family Information

Homologous gene family
HOM04D000937
(298 genes in 53 species)
specific family
Orthologous gene family
ORTHO04D001080
(239 genes in 53 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
Phytochrome

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0007165
IEA
InterProsignal transduction
GO:0009584
IEA
InterProdetection of visible light
GO:0017006
IEA
PLAZA Homology (enrichment)protein-tetrapyrrole linkage HOM04D000937
GO:0018298
IEA
PLAZA Homology (enrichment)protein-chromophore linkage HOM04D000937
GO:0009585
IEA
PLAZA Homology (enrichment)red, far-red light phototransduction HOM04D000937

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000155
IEA
InterProphosphorelay sensor kinase activity
GO:0009881
IEA
PLAZA Homology (enrichment)photoreceptor activity HOM04D000937
GO:0042803
IEA
PLAZA Homology (enrichment)protein homodimerization activity HOM04D000937
GO:0005515
IEA
PLAZA Homology (enrichment)protein binding HOM04D000937

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000014PAS domain
IPR003594Histidine kinase-like ATPase, C-terminal domain
IPR013767PAS fold
IPR003661Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
IPR001294Phytochrome
IPR005467Histidine kinase domain
IPR001610PAC motif

Mapman id Description
26.1.1.1.External stimuli response.light.red/far red light.phytochrome photoreceptor (PHY)