Gene: Ciclev10021374m.g (Citrus clementina)

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Gene Identifier
Ciclev10021374m.g
Transcript Identifier
Ciclev10021374m
Gene Type
Coding gene
Location
scaffold_3 : 5319248-5320749 : negative

Family Information

Homologous gene family
HOM04D000379
(630 genes in 53 species)
specific family
Orthologous gene family
ORTHO04D000283
(584 genes in 53 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
tidCiclev10021374m.v1.0
idCiclev10021374m.g.v1.0
pacid20807896

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0010321
IEA
PLAZA Integrative Orthologyregulation of vegetative phase change AT4G17460
GO:0048507
IEA
PLAZA Integrative Orthologymeristem development AT4G17460
GO:0080127
IEA
PLAZA Integrative Orthologyfruit septum development AT4G17460
GO:0009641
IEA
PLAZA Integrative Orthologyshade avoidance AT4G16780
GO:0010015
IEA
PLAZA Integrative Orthologyroot morphogenesis AT4G17460
GO:0016573
IEA
PLAZA Integrative Orthologyhistone acetylation AT4G17460
GO:0010016
IEA
PLAZA Integrative Orthologyshoot system morphogenesis AT4G16780
GO:0010017
IEA
PLAZA Integrative Orthologyred or far-red light signaling pathway AT4G16780
GO:0045893
IEA
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT4G17460
GO:0009908
IEA
PLAZA Integrative Orthologyflower development AT4G17460
GO:0010218
IEA
PLAZA Integrative Orthologyresponse to far red light AT4G16780
GO:0048467
IEA
PLAZA Integrative Orthologygynoecium development AT4G17460
GO:0045892
IEA
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT4G16780
GO:0009826
IEA
PLAZA Integrative Orthologyunidimensional cell growth AT4G16780
GO:0003006
IEA
PLAZA Integrative Orthologydevelopmental process involved in reproduction AT4G17460
GO:0048364
IEA
PLAZA Integrative Orthologyroot development AT4G16780
GO:0009733
IEA
PLAZA Integrative Orthologyresponse to auxin AT4G16780
GO:0009734
IEA
PLAZA Integrative Orthologyauxin-activated signaling pathway AT5G47370
GO:0009416
IEA
PLAZA Integrative Orthologyresponse to light stimulus AT4G17460
GO:0009735
IEA
PLAZA Integrative Orthologyresponse to cytokinin AT4G16780
GO:0010582
IEA
PLAZA Integrative Orthologyfloral meristem determinacy AT4G17460
GO:0008283
IEA
PLAZA Integrative Orthologycell proliferation AT4G16780

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
InterProtranscription factor activity, sequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0010485
IEA
PLAZA Integrative OrthologyH4 histone acetyltransferase activity AT4G17460
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT4G17460
GO:0004402
IEA
PLAZA Integrative Orthologyhistone acetyltransferase activity AT4G17460
GO:0042803
IEA
PLAZA Integrative Orthologyprotein homodimerization activity AT4G16780
GO:0043621
IEA
PLAZA Integrative Orthologyprotein self-association AT4G17460
GO:0016407
IEA
PLAZA Integrative Orthologyacetyltransferase activity AT4G17460
GO:0010484
IEA
PLAZA Integrative OrthologyH3 histone acetyltransferase activity AT4G17460

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0000123
IEA
PLAZA Integrative Orthologyhistone acetyltransferase complex AT4G17460
GO:0005829
IEA
PLAZA Integrative Orthologycytosol AT4G17460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006712HD-ZIP protein, N-terminal
IPR001356Homeobox domain
IPR003106Leucine zipper, homeobox-associated
IPR000047Helix-turn-helix motif
IPR017970Homeobox, conserved site
IPR009057Homeobox domain-like

Mapman id Description
15.5.3.1.RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)