Dicots PLAZA 4.5 gene overview : Cc10_g14630

Gene: Cc10_g14630 (Coffea canephora)

Overview

Gene Identifier: Cc10_g14630
Transcript Identifier: Cc10_g14630.1
Gene Type: Coding gene
Location: chr10 : 25386358-25388170 : positive

Family Information

Homologous gene family: HOM04D000133
(1389 genes in 52 species)
specific family
Orthologous gene family: ORTHO04D013773
(9 genes in 4 species)
specific family

Descriptions

Description: Putative Protein of Unknown Function (DUF239)

Identifiers

Type	Value
tid	GSCOCT00033604001
id	GSCOCG00033604001
pid	GSCOCP00033604001

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

No GO associations found for this gene.

InterPro	Description
IPR004314	Neprosin

Mapman id	Description
35.2	not assigned.not annotated