Gene: Cc09_g08730 (Coffea canephora)

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Gene Identifier
Cc09_g08730
Transcript Identifier
Cc09_g08730.1
Gene Type
Coding gene
Location
chr9 : 13623305-13630901 : positive

Family Information

Homologous gene family
HOM04D005697
(68 genes in 51 species)
specific family

Descriptions

Description
plastid transcriptionally active 12

Identifiers

Type Value
tidGSCOCT00020851001
idGSCOCG00020851001
pidGSCOCP00020851001

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009416
IEA
InterProresponse to light stimulus
GO:0090228
IEA
InterPropositive regulation of red or far-red light signaling pathway
GO:0010114
IEA
PLAZA Integrative Orthologyresponse to red light AT2G34640
GO:0009637
IEA
PLAZA Integrative Orthologyresponse to blue light AT2G34640
GO:0042793
IEA
PLAZA Integrative Orthologytranscription from plastid promoter AT2G34640
GO:0010218
IEA
PLAZA Integrative Orthologyresponse to far red light AT2G34640
GO:0045893
IEA
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT2G34640

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0009507
IEA
InterProchloroplast
GO:0000427
IEA
PLAZA Integrative Orthologyplastid-encoded plastid RNA polymerase complex AT2G34640
GO:0009508
IEA
PLAZA Integrative Orthologyplastid chromosome AT2G34640
GO:0009295
IEA
PLAZA Integrative Orthologynucleoid AT2G34640

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR034581Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12

Mapman id Description
15.6.1.2.2.5.RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP5/TAC12
26.4.1.3.External stimuli response.temperature.sensing and signalling.transcriptional coactivator (HEMERA)