Dicots PLAZA 4.5 gene overview : Cc09_g07760

Gene: Cc09_g07760 (Coffea canephora)

Overview

Gene Identifier: Cc09_g07760
Transcript Identifier: Cc09_g07760.1
Gene Type: Coding gene
Location: chr9 : 9921869-9924833 : positive

Family Information

Homologous gene family: HOM04D005885
(67 genes in 48 species)
specific family

Descriptions

Description: Pentatricopeptide repeat-containing protein At4g20740

Identifiers

Type	Value
tid	GSCOCT00036200001
id	GSCOCG00036200001
pid	GSCOCP00036200001

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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...a custom phylogenetic tree using this gene as seed.

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Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011990	Tetratricopeptide-like helical domain
IPR002885	Pentatricopeptide repeat

Mapman id	Description
35.1	not assigned.annotated