Dicots PLAZA 4.5 gene overview : Cc01_g00960

Gene: Cc01_g00960 (Coffea canephora)

Overview

Gene Identifier: Cc01_g00960
Transcript Identifier: Cc01_g00960.1
Gene Type: Coding gene
Location: chr1 : 1538604-1542517 : positive

Family Information

Homologous gene family: HOM04D002347
(138 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D002977
(125 genes in 55 species)
specific family

Descriptions

Description: Putative Uncharacterized protein yqeH

Identifiers

Type	Value
tid	GSCOCT00038005001
id	GSCOCG00038005001
pid	GSCOCP00038005001

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

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Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005525	IEA	InterPro	GTP binding

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR006073	GTP binding domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Mapman id	Description
35.1	not assigned.annotated