Dicots PLAZA 4.5 gene overview : Cc01_g00810

Gene: Cc01_g00810 (Coffea canephora)

Overview

Gene Identifier: Cc01_g00810
Transcript Identifier: Cc01_g00810.1
Gene Type: Coding gene
Location: chr1 : 1291552-1294936 : positive

Family Information

Homologous gene family: HOM04D001938
(163 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D007375
(67 genes in 54 species)
specific family

Descriptions

Description: Putative Protein midA, mitochondrial

Identifiers

Type	Value
tid	GSCOCT00011076001
id	GSCOCG00011076001
pid	GSCOCP00011076001

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0015991	IEA	PLAZA Homology (enrichment)	ATP hydrolysis coupled proton transport	HOM04D001938

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008270	IEA	PLAZA Integrative Orthology	zinc ion binding	AT3G28700
GO:0015078	IEA	PLAZA Homology (enrichment)	hydrogen ion transmembrane transporter activity	HOM04D001938

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0033179	IEA	PLAZA Homology (enrichment)	proton-transporting V-type ATPase, V0 domain	HOM04D001938

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR003788	Protein arginine methyltransferase NDUFAF7
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase

Mapman id	Description
35.2	not assigned.not annotated