Dicots PLAZA 4.5 gene overview : Cc00_g00150

Gene: Cc00_g00150 (Coffea canephora)

Overview

Gene Identifier: Cc00_g00150
Transcript Identifier: Cc00_g00150.1
Gene Type: Coding gene
Location: chr0 : 271444-273585 : negative

Family Information

Homologous gene family: HOM04D006963
(58 genes in 49 species)
specific family

Descriptions

Description: Pentatricopeptide repeat-containing protein At3g42630

Identifiers

Type	Value
tid	GSCOCT00036091001
id	GSCOCG00036091001
pid	GSCOCP00036091001

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	IEA	PLAZA Integrative Orthology	chloroplast	AT3G42630

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002885	Pentatricopeptide repeat

Mapman id	Description
35.1	not assigned.annotated