Dicots PLAZA 4.5 gene overview : Ca_15046.g

Gene: Ca_15046.g (Cicer arietinum)

Overview

Gene Identifier: Ca_15046.g
Transcript Identifier: Ca_15046
Gene Type: Coding gene
Location: Ca8 : 1303138-1304626 : negative

Family Information

Homologous gene family: HOM04D000066
(2139 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D003071
(123 genes in 54 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
Swissprot	Q9LJZ5

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006511	IEA	PLAZA Integrative Orthology	ubiquitin-dependent protein catabolic process	AT3G20060
GO:0008283	IEA	PLAZA Integrative Orthology	cell proliferation	AT3G20060

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004842	IEA	PLAZA Integrative Orthology	ubiquitin-protein transferase activity	AT3G20060

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	IEA	PLAZA Integrative Orthology	cytoplasm	AT3G20060
GO:0005634	IEA	PLAZA Integrative Orthology	nucleus	AT3G20060

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000608	Ubiquitin-conjugating enzyme E2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like
IPR023313	Ubiquitin-conjugating enzyme, active site

Mapman id	Description
13.3.4.1.2	.Cell cycle organisation.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.E2 ubiquitin conjugating protein (APC/C)