Dicots PLAZA 4.5 gene overview : Ca_15033.g

Gene: Ca_15033.g (Cicer arietinum)

Overview

Gene Identifier: Ca_15033.g
Transcript Identifier: Ca_15033
Gene Type: Coding gene
Location: Ca8 : 1403781-1413022 : positive

Family Information

Homologous gene family: HOM04D000316
(699 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D001645
(183 genes in 54 species)
specific family

Duplication type: Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
Swissprot	Q9T0A0

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008152	IEA	InterPro	metabolic process
GO:0010025	IEA	PLAZA Tree-based Orthology	wax biosynthetic process	AT1G49430
GO:0010311	IEA	PLAZA Tree-based Orthology	lateral root formation	AT1G49430
GO:0006631	IEA	PLAZA Integrative Orthology	fatty acid metabolic process	AT4G23850
GO:0050832	IEA	PLAZA Tree-based Orthology	defense response to fungus	AT1G49430
GO:0006633	IEA	PLAZA Integrative Orthology	fatty acid biosynthetic process	AT4G23850
GO:0010143	IEA	PLAZA Tree-based Orthology	cutin biosynthetic process	AT1G49430

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003824	IEA	InterPro	catalytic activity
GO:0004467	IEA	PLAZA Integrative Orthology	long-chain fatty acid-CoA ligase activity	AT4G23850
GO:0031957	IEA	PLAZA Tree-based Orthology	very long-chain fatty acid-CoA ligase activity	AT1G49430

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005886	IEA	PLAZA Integrative Orthology	plasma membrane	AT4G23850
GO:0005783	IEA	PLAZA Integrative Orthology	endoplasmic reticulum	AT1G64400
GO:0005794	IEA	PLAZA Integrative Orthology	Golgi apparatus	AT4G23850
GO:0009506	IEA	PLAZA Tree-based Orthology	plasmodesma	AT1G49430

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000873	AMP-dependent synthetase/ligase
IPR020845	AMP-binding, conserved site

Mapman id	Description
50.6.2	.Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond