Dicots PLAZA 4.5 gene overview : Ca_11841.g

Gene: Ca_11841.g (Cicer arietinum)

Overview

Gene Identifier: Ca_11841.g
Transcript Identifier: Ca_11841
Gene Type: Coding gene
Location: Ca8 : 800811-804690 : positive

Family Information

Homologous gene family: HOM04D005160
(73 genes in 45 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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...a custom phylogenetic tree using this gene as seed.

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006368	IEA	InterPro	transcription elongation from RNA polymerase II promoter
GO:0016570	IEA	InterPro	histone modification
GO:0040007	IEA	PLAZA Integrative Orthology	growth	AT5G43630
GO:0006355	IEA	PLAZA Integrative Orthology	regulation of transcription, DNA-templated	AT5G43630

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003677	IEA	InterPro	DNA binding
GO:0008270	IEA	PLAZA Homology (enrichment)	zinc ion binding	HOM04D005160
GO:0003676	IEA	PLAZA Homology (enrichment)	nucleic acid binding	HOM04D005160

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016593	IEA	InterPro	Cdc73/Paf1 complex
GO:0005634	IEA	PLAZA Integrative Orthology	nucleus	AT5G43630

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR031102	RNA polymerase-associated protein Rtf1
IPR004343	Plus-3 domain

Mapman id	Description
27.1.5.4	.Multi-process regulation.circadian clock system.morning element regulation.repression factor (TZP)