Dicots PLAZA 4.5 gene overview : Ca_00020.g

Gene: Ca_00020.g (Cicer arietinum)

Overview

Gene Identifier: Ca_00020.g
Transcript Identifier: Ca_00020
Gene Type: Coding gene
Location: Ca1 : 237878-240097 : positive

Family Information

Homologous gene family: HOM04D000241
(875 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D000128
(866 genes in 55 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
Swissprot	Q5RJH2

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

No GO associations found for this gene.

InterPro	Description
IPR000008	C2 domain
IPR013583	Phosphoribosyltransferase C-terminal

Mapman id	Description
35.1	not assigned.annotated