Dicots PLAZA 4.5 gene overview : COL.COLO4_00938

Gene: COL.COLO4_00938 (Corchorus olitorius)

Overview

Gene Identifier: COL.COLO4_00938
Transcript Identifier: COL.rna632
Gene Type: Coding gene
Location: AWUE01003251.1 : 557-661 : positive

Family Information

Homologous gene family: HOM04D000405
(600 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D010443
(34 genes in 23 species)
specific family

Descriptions

Description: Ribosomal protein L22/L17

Identifiers

Type	Value
tid	rna632
id	gene930
id	COLO4_00938
pid	OMP13796.1
UniProtKB	A0A1R3L374

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006412	IEA	UniProt	translation
GO:0006412	IEA	InterPro	translation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003735	IEA	UniProt	structural constituent of ribosome
GO:0003735	IEA	InterPro	structural constituent of ribosome

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005840	IEA	UniProt	ribosome
GO:0005840	IEA	InterPro	ribosome
GO:0005622	IEA	PLAZA Homology (enrichment)	intracellular	HOM04D000405

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001063	Ribosomal protein L22/L17

Mapman id	Description
35.2	not assigned.not annotated