Dicots PLAZA 4.5 gene overview : C.cajan_37800.g

Gene: C.cajan_37800.g (Cajanus cajan)

Overview

Gene Identifier: C.cajan_37800.g
Transcript Identifier: C.cajan_37800
Gene Type: Coding gene
Location: Scaffold127392 : 160786-165956 : positive

Family Information

Homologous gene family: HOM04D000242
(871 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D006705
(71 genes in 54 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0055114	IEA	InterPro	oxidation-reduction process

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016491	IEA	InterPro	oxidoreductase activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010287	IEA	PLAZA Integrative Orthology	plastoglobule	AT1G06690
GO:0009535	IEA	PLAZA Integrative Orthology	chloroplast thylakoid membrane	AT1G06690
GO:0009941	IEA	PLAZA Integrative Orthology	chloroplast envelope	AT1G06690
GO:0009507	IEA	PLAZA Integrative Orthology	chloroplast	AT1G06690

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR023210	NADP-dependent oxidoreductase domain
IPR020471	Aldo/keto reductase
IPR018170	Aldo/keto reductase, conserved site

Mapman id	Description
35.1	not assigned.annotated