Dicots PLAZA 4.5 gene overview : C.cajan_13324.g

Gene: C.cajan_13324.g (Cajanus cajan)

Overview

Gene Identifier: C.cajan_13324.g
Transcript Identifier: C.cajan_13324
Gene Type: Coding gene
Location: CcLG06 : 23718134-23721028 : negative

Family Information

Homologous gene family: HOM04D000036
(2681 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D001925
(165 genes in 48 species)
specific family

Duplication type: Tandem duplicate and Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006468	IEA	PLAZA Homology (enrichment)	protein phosphorylation	HOM04D000036

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0005524	IEA	PLAZA Homology (enrichment)	ATP binding	HOM04D000036
GO:0004672	IEA	PLAZA Homology (enrichment)	protein kinase activity	HOM04D000036

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR032675	Leucine-rich repeat domain, L domain-like
IPR001611	Leucine-rich repeat
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type

Mapman id	Description
35.1	not assigned.annotated