Gene: Brara.E01100 (Brassica rapa)

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Gene Identifier
Brara.E01100
Transcript Identifier
Brara.E01100.1
Gene Type
Coding gene
Location
A05 : 6526321-6529787 : negative

Family Information

Homologous gene family
HOM04D000650
(415 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D003029
(124 genes in 54 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
tidBrara.E01100.1.v1.3
idBrara.E01100.v1.3
pidBrara.E01100.1.p
pacid30625740

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010119
IEA
PLAZA Integrative Orthologyregulation of stomatal movement AT2G32950
GO:0009649
IEA
PLAZA Integrative Orthologyentrainment of circadian clock AT2G32950
GO:0046283
IEA
PLAZA Integrative Orthologyanthocyanin-containing compound metabolic process AT2G32950
GO:0048573
IEA
PLAZA Integrative Orthologyphotoperiodism, flowering AT2G32950
GO:0009647
IEA
PLAZA Integrative Orthologyskotomorphogenesis AT2G32950
GO:0009641
IEA
PLAZA Integrative Orthologyshade avoidance AT2G32950
GO:0009640
IEA
PLAZA Integrative Orthologyphotomorphogenesis AT2G32950
GO:0006281
IEA
PLAZA Integrative OrthologyDNA repair AT2G32950

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004842
IEA
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT2G32950
GO:0042802
IEA
PLAZA Integrative Orthologyidentical protein binding AT2G32950

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000152
IEA
PLAZA Integrative Orthologynuclear ubiquitin ligase complex AT2G32950
GO:0005634
IEA
PLAZA Integrative Orthologynucleus AT2G32950
GO:0016604
IEA
PLAZA Integrative Orthologynuclear body AT2G32950

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR015943WD40/YVTN repeat-like-containing domain
IPR001680WD40 repeat
IPR019775WD40 repeat, conserved site
IPR017907Zinc finger, RING-type, conserved site
IPR017986WD40-repeat-containing domain

Mapman id Description
18.4.16.Protein modification.phosphorylation.protein kinase (PEK)
19.2.2.8.3.4.1.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP1-SPA substrate adaptor subcomplex.component COP1
26.1.1.3.3.1.External stimuli response.light.red/far red light.CUL4-DDB1 ubiquitination complex.COP1-SPA substrate adaptor subcomplex.component COP1