Gene: Brara.E00960 (Brassica rapa)

Overview top

Gene Identifier
Brara.E00960
Transcript Identifier
Brara.E00960.1
Gene Type
Coding gene
Location
A05 : 5640428-5642593 : positive

Family Information

Homologous gene family
HOM04D005697
(68 genes in 51 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
tidBrara.E00960.1.v1.3
idBrara.E00960.v1.3
pidBrara.E00960.1.p
pacid30625259

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009416
IEA
InterProresponse to light stimulus
GO:0090228
IEA
InterPropositive regulation of red or far-red light signaling pathway
GO:0010114
IEA
PLAZA Integrative Orthologyresponse to red light AT2G34640
GO:0009637
IEA
PLAZA Integrative Orthologyresponse to blue light AT2G34640
GO:0042793
IEA
PLAZA Integrative Orthologytranscription from plastid promoter AT2G34640
GO:0010218
IEA
PLAZA Integrative Orthologyresponse to far red light AT2G34640
GO:0045893
IEA
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT2G34640

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0009507
IEA
InterProchloroplast
GO:0000427
IEA
PLAZA Integrative Orthologyplastid-encoded plastid RNA polymerase complex AT2G34640
GO:0009508
IEA
PLAZA Integrative Orthologyplastid chromosome AT2G34640
GO:0009295
IEA
PLAZA Integrative Orthologynucleoid AT2G34640

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR034581Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12

Mapman id Description
15.6.1.2.2.5.RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP5/TAC12
26.4.1.3.External stimuli response.temperature.sensing and signalling.transcriptional coactivator (HEMERA)