Dicots PLAZA 4.5 gene overview : Brara.C02742

Gene: Brara.C02742 (Brassica rapa)

Overview

Gene Identifier: Brara.C02742
Transcript Identifier: Brara.C02742.1
Gene Type: Coding gene
Location: A03 : 14028058-14033143 : negative

Family Information

Homologous gene family: HOM04D005218
(72 genes in 54 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
tid	Brara.C02742.1.v1.3
id	Brara.C02742.v1.3
pid	Brara.C02742.1.p
pacid	30616919

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006364	IEA	InterPro	rRNA processing

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0032040	IEA	InterPro	small-subunit processome

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR015943	WD40/YVTN repeat-like-containing domain
IPR007319	Small-subunit processome, Utp21
IPR024977	Anaphase-promoting complex subunit 4, WD40 domain
IPR001680	WD40 repeat
IPR019775	WD40 repeat, conserved site
IPR017986	WD40-repeat-containing domain

Mapman id	Description
17.1.3.2.1.3.2	.Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpB module.assembly factor (UTP21)