Gene: Bo7g008400 (Brassica oleracea)

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Gene Identifier
Bo7g008400
Transcript Identifier
Bo7g008400.1
Gene Type
Coding gene
Location
C7 : 2556030-2558356 : positive

Family Information

Homologous gene family
HOM04D002106
(152 genes in 54 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
tidtranscript:Bo7g008400.1
uniprotA0A0D3D2T6
refseq_proteinXP_013593058.1
entrez_gene106301249
refseq_dnaXM_013737604.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010114
IEA
PLAZA Integrative Orthologyresponse to red light AT5G57360
GO:0010498
IEA
PLAZA Integrative Orthologyproteasomal protein catabolic process AT5G57360
GO:0031146
IEA
PLAZA Integrative OrthologySCF-dependent proteasomal ubiquitin-dependent protein catabolic process AT5G57360
GO:0010468
IEA
PLAZA Integrative Orthologyregulation of gene expression AT1G68050
GO:0043153
IEA
PLAZA Integrative Orthologyentrainment of circadian clock by photoperiod AT5G57360
GO:0009908
IEA
PLAZA Integrative Orthologyflower development AT5G57360
GO:0006511
IEA
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT1G68050
GO:0009911
IEA
PLAZA Integrative Orthologypositive regulation of flower development AT1G68050
GO:0042752
IEA
PLAZA Integrative Orthologyregulation of circadian rhythm AT5G57360
GO:0009637
IEA
PLAZA Integrative Orthologyresponse to blue light AT1G68050
GO:0007623
IEA
PLAZA Integrative Orthologycircadian rhythm AT1G68050
GO:0006355
IEA
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G68050

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0001047
IEA
PLAZA Integrative Orthologycore promoter binding AT1G68050
GO:0009882
IEA
PLAZA Integrative Orthologyblue light photoreceptor activity AT5G57360

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019005
IEA
PLAZA Integrative OrthologySCF ubiquitin ligase complex AT5G57360
GO:0005829
IEA
PLAZA Integrative Orthologycytosol AT5G57360
GO:0005634
IEA
PLAZA Integrative Orthologynucleus AT5G57360
GO:0015030
IEA
PLAZA Integrative OrthologyCajal body AT2G18915

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000014PAS domain
IPR015915Kelch-type beta propeller
IPR001810F-box domain
IPR001610PAC motif

Mapman id Description
19.2.2.8.1.4.4.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.component ADO
26.1.2.3.1.External stimuli response.light.UV-A/blue light.zeitlupe-mediated photoperception.photoreceptor (ADO)