Dicots PLAZA 4.5 gene overview : Bo5g137280

Gene: Bo5g137280 (Brassica oleracea)

Overview

Gene Identifier: Bo5g137280
Transcript Identifier: Bo5g137280.1
Gene Type: Coding gene
Location: C5 : 42732662-42734348 : negative

Family Information

Homologous gene family: HOM04D005570
(69 genes in 52 species)
specific family

Duplication type: Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
tid	transcript:Bo5g137280.1
uniprot	A0A0D3CLE2
refseq_protein	XP_013637893.1
entrez_gene	106343271
refseq_dna	XM_013782439.1

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0015919	IEA	UniProt	peroxisomal membrane transport
GO:0015919	IEA	InterPro	peroxisomal membrane transport
GO:0043574	IEA	PLAZA Integrative Orthology	peroxisomal transport	AT3G10572

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	PLAZA Integrative Orthology	protein binding	AT3G10572

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005622	IEA	UniProt	intracellular
GO:0005730	IEA	PLAZA Integrative Orthology	nucleolus	AT3G10572
GO:0005777	IEA	PLAZA Integrative Orthology	peroxisome	AT3G10572

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR034571	Protein APEM9

Mapman id	Description
23.4.1.5.2	.Protein translocation.peroxisome.importomer translocation system.receptor export system.PEX1-PEX6 recruitment component APM9