Dicots PLAZA 4.5 gene overview : Bo5g034280

Gene: Bo5g034280 (Brassica oleracea)

Overview

Gene Identifier: Bo5g034280
Transcript Identifier: Bo5g034280.1
Gene Type: Coding gene
Location: C5 : 11024402-11026680 : positive

Family Information

Homologous gene family: HOM04D001386
(213 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D004618
(89 genes in 48 species)
specific family

Duplication type: Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
tid	transcript:Bo5g034280.1
uniprot	A0A0D3CC22
refseq_protein	XP_013584990.1
entrez_gene	106293904
refseq_dna	XM_013729536.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0046836	IEA	InterPro	glycolipid transport

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0017089	IEA	UniProt	glycolipid transporter activity
GO:0017089	IEA	InterPro	glycolipid transporter activity
GO:0051861	IEA	UniProt	glycolipid binding
GO:0051861	IEA	InterPro	glycolipid binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	IEA	UniProt	cytoplasm
GO:0005737	IEA	InterPro	cytoplasm

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR014830	Glycolipid transfer protein domain

Mapman id	Description
35.1	not assigned.annotated