Gene: Bo2g009960 (Brassica oleracea)

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Gene Identifier
Bo2g009960
Transcript Identifier
Bo2g009960.1
Gene Type
Coding gene
Location
C2 : 2217555-2221698 : positive

Family Information

Homologous gene family
HOM04D000253
(847 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D006098
(75 genes in 53 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
tidtranscript:Bo2g009960.1
uniprotA0A0D3AIG3
refseq_proteinXP_013621234.1
entrez_gene106327596
refseq_dnaXM_013765780.1

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Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
UniProtGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
UniProtGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0046872
IEA
UniProtmetal ion binding
GO:0003746
IEA
PLAZA Homology (enrichment)translation elongation factor activity HOM04D000253

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004161Translation elongation factor EFTu-like, domain 2
IPR004160Translation elongation factor EFTu/EF1A, C-terminal
IPR000795Transcription factor, GTP-binding domain
IPR001876Zinc finger, RanBP2-type
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
IPR009000Translation protein, beta-barrel domain

Mapman id Description
16.8.1.2.7.RNA processing.RNA surveillance.exosome complex.associated co-factor activities.EXO9-SUPERKILLER interaction factor (SKI7)
17.3.3.1.2.Protein biosynthesis.mRNA quality control.NGD No-Go Decay.DOM34-HBS1 aberrant mRNA detection complex.GTPase component HBS1/SPL33