Dicots PLAZA 4.5 gene overview : Araip.2ZM33

Gene: Araip.2ZM33 (Arachis ipaensis)

Overview

Gene Identifier: Araip.2ZM33
Transcript Identifier: Araip.2ZM33.1
Gene Type: Coding gene
Location: Araip.B06 : 43523359-43523942 : positive

Family Information

Homologous gene family: HOM04D002539
(130 genes in 55 species)
specific family
Orthologous gene family: ORTHO04D003070
(123 genes in 55 species)
specific family

Descriptions

Description: PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform X2 [Glycine max]

Identifiers

Type	Value

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009451	IEA	PLAZA Homology (enrichment)	RNA modification	HOM04D002539
GO:0001522	IEA	PLAZA Homology (enrichment)	pseudouridine synthesis	HOM04D002539

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009982	IEA	PLAZA Homology (enrichment)	pseudouridine synthase activity	HOM04D002539
GO:0003723	IEA	PLAZA Homology (enrichment)	RNA binding	HOM04D002539

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

No InterPro domains detected for this gene.

Mapman id	Description
35.2	not assigned.not annotated