Gene: Achn276831 (Actinidia chinensis)

Overview top

Gene Identifier
Achn276831
Transcript Identifier
Achn276831-TA
Gene Type
Coding gene
Location
Chr19 : 1904108-1914129 : negative

Family Information

Homologous gene family
HOM04D000854
(325 genes in 55 species)
specific family
Orthologous gene family
ORTHO04D007086
(69 genes in 53 species)
specific family

Descriptions

Description
Histone deacetylase; contains IPR000286 (Histone deacetylase superfamily), IPR006501 (Pectinesterase inhibitor), IPR023801 (Histone deacetylase domain)

Identifiers

Type Value

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043086
IEA
InterPronegative regulation of catalytic activity
GO:0045604
IEA
PLAZA Integrative Orthologyregulation of epidermal cell differentiation AT5G61070
GO:0090042
IEA
PLAZA Integrative Orthologytubulin deacetylation AT4G33470
GO:0010053
IEA
PLAZA Integrative Orthologyroot epidermal cell differentiation AT5G61070

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046910
IEA
InterPropectinesterase inhibitor activity
GO:0004857
IEA
InterProenzyme inhibitor activity
GO:0051721
IEA
PLAZA Integrative Orthologyprotein phosphatase 2A binding AT4G33470
GO:0048487
IEA
PLAZA Integrative Orthologybeta-tubulin binding AT4G33470
GO:0004407
IEA
PLAZA Integrative Orthologyhistone deacetylase activity AT5G61070
GO:0043621
IEA
PLAZA Integrative Orthologyprotein self-association AT4G33470
GO:0043014
IEA
PLAZA Integrative Orthologyalpha-tubulin binding AT4G33470
GO:0042903
IEA
PLAZA Integrative Orthologytubulin deacetylase activity AT4G33470

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IEA
PLAZA Integrative Orthologycytosol AT4G33470
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm AT5G61070
GO:0009507
IEA
PLAZA Integrative Orthologychloroplast AT4G33470
GO:0005634
IEA
PLAZA Integrative Orthologynucleus AT5G61070

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR034086Pectinesterase inhibitor, plant
IPR023801Histone deacetylase domain
IPR000286Histone deacetylase superfamily
IPR006501Pectinesterase inhibitor domain

Mapman id Description
12.3.2.1.2.Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase